BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026G06LP1|AL428606
(817 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1043 1541 0.0
>3x_Contig1043
Length = 5132
Score = 1541 bits (772), Expect = 0.0
Identities = 798/813 (98%)
Strand = Plus / Minus
Query: 3 tacgatgatgtatcacaaggctaattaatactgtcaccaccataataaaagactaatgga 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4314 tacgatgatgtatcacaaggctaattaatactgtcaccaccataataaaagactaatgga 4255
Query: 63 tataaaaacgacgacagcacatattaaagcattgctgagcgcacctgtcctctggaatcg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4254 tataaaaacgacgacagcacatattaaagcattgctgagcgcacctgtcctctggaatcg 4195
Query: 123 tgagaatctctgaatagtattacaaacgtttacttccgttaaccgttgatctacgtngtt 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 4194 tgagaatctctgaatagtattacaaacgtttacttccgttaaccgttgatctacgtagtt 4135
Query: 183 ttatgaaaagaattagaaaaaaacaattgtgcgtccgttggggaataatgttatcatata 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4134 ttatgaaaagaattagaaaaaaacaattgtgcgtccgttggggaataatgttatcatata 4075
Query: 243 catacacgattatcactctgacaaaaataacagattagtatatgaagacggatgsraaac 302
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 4074 catacacgattatcactctgacaaaaataacagattagtatatgaagacggatgcaaaac 4015
Query: 303 ctacttccttgtccacttctttgttagaacttcgtagtcctttcttgttttgtgtttttt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4014 ctacttccttgtccacttctttgttagaacttcgtagtcctttcttgttttgtgtttttt 3955
Query: 363 ttgttttgcrtttttcatagcratttatgtagtctttggtgagaaactttgccagtgtta 422
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3954 ttgttttgcatttttcatagcaatttatgtagtctttggtgagaaactttgccagtgtta 3895
Query: 423 acttgaggtttaatatgccaaaactttttgtttntnatattcaatgaaatagtgttacva 482
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
Sbjct: 3894 acttgaggtttaatatgccaaaactttttgtttataatattcaatgaaatagtgttacaa 3835
Query: 483 tttvaggcttaggratttttcaccttacctatttgggaaattgcatcaacatctcacatt 542
||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 3834 tttaaggcttaggaatttttcaccttacctatttggaaaattgcatcaacatctcaaatt 3775
Query: 543 cttgatccggaaatcagagcgataatttatccgtctcaggttccacttctatagggratc 602
||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3774 cttgatccgaaaataagagcgataatttatccgtctcaggttccacttctatagggaatc 3715
Query: 603 taggggtgctacttggattggatgaagatcctgaagcaatgtccgaggtcgtcgtagcat 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3714 taggggtgctacttggattggatgaagatcctgaagcaatgtccgaggtcgtcgtagcat 3655
Query: 663 gttgaagtactggtgtggttttactgttcgtaagtaatccgttgttttcgctatttccaa 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3654 gttgaagtactggtgtggttttactgttcgtaagtaatccgttgttttcgctatttccaa 3595
Query: 723 tattagagccaaaaatcccatctgagccagtgcccactataatcgaggaactgctatctg 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3594 tattagagccaaaaatcccatctgagccagtgcccactataatcgaggaactgctatctg 3535
Query: 783 gaatgagtgagctcgagcccgagggtagttgat 815
|||||||||||||||||||||||||||||||||
Sbjct: 3534 gaatgagtgagctcgagcccgagggtagttgat 3502
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5561
Number of Sequences: 1807
Number of extensions: 5561
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 817
length of database: 10,358,551
effective HSP length: 16
effective length of query: 801
effective length of database: 10,329,639
effective search space: 8274040839
effective search space used: 8274040839
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)